Common Stock, par value $0.001 per share

Green Plains Inc.

1811 AKSARBEN DRIVE, OMAHA, NE, 68106

Item 5(a) is hereby amended and restated to read as follows: The aggregate percentage of Shares reported owned by each person named herein is based upon a denominator that is the sum of: (i) 65,399,452 Shares outstanding as of May 5, 2025, as disclosed in the Issuer's Quarterly Report on Form 10-Q filed with the Securities and Exchange Commission on May 8, 2025 and (ii) the number of Shares underlying the Warrants held by the Reporting Persons, as applicable. As of the date hereof, Ancora Merlin beneficially owned directly 63,961 Shares, constituting 0% of the Shares outstanding. As of the date hereof, Ancora Merlin Institutional beneficially owned directly 1,115,537 Shares, constituting 1.7% of the Shares outstanding. As of the date hereof, Ancora Catalyst beneficially owned directly 106,309 Shares, constituting 0% of the Shares outstanding. As of the date hereof, Ancora Catalyst Institutional beneficially owned directly 1,100,843 Shares, constituting 1.6% of the Shares outstanding. As of the date hereof, Ancora Bellator beneficially owned directly 706,242 Shares, constituting 1.1% of the Shares outstanding. As of the date hereof, Ancora Impact Q beneficially owned directly 400,904 Shares, constituting 0% of the Shares outstanding. As of the date hereof, Ancora Impact S beneficially owned directly 822,563 Shares, constituting approximately 1.2% of the Shares outstanding. As of the date hereof, Ancora SPC H beneficially owned directly 1,021,660 Shares, constituting approximately 1.5% of the Shares outstanding. As of the date hereof, Ancora Alternatives, as the investment advisor to each of the Ancora Funds and the Ancora Alternatives SMAs and the general partner of each of the Ancora LP Funds, may be deemed to beneficially own 5,834,040 Shares, constituting approximately 8.7% of the Shares outstanding and consisting of (i) 63,961 Shares beneficially owned directly by Ancora Merlin, (ii) 1,115,537 Shares beneficially owned directly by Ancora Merlin Institutional, (iii) 106,309 Shares beneficially owned directly by Ancora Catalyst, (iv) 1,100,843 Shares beneficially owned directly by Ancora Catalyst Institutional, (v) 706,242 Shares beneficially owned directly by Ancora Bellator, (vi) 400,904 Shares beneficially owned directly by Ancora Impact Q, (vii) 822,563 Shares beneficially owned directly by Ancora Impact S, (viii) 1,021,660 Shares beneficially owned directly by Ancora SPC H and (ix) 496,021 Shares held in the Ancora Alternatives SMAs. As of the date hereof, Ancora Family Wealth, as the investment advisor to the Ancora Family Wealth SMAs, may be deemed to beneficially own 6,675 Shares, constituting 0% of the Shares outstanding and consisting of 6,675 Shares held in the Ancora Family Wealth SMAs. As of the date hereof, Inverness Holdings, as the sole member of Ancora Family Wealth, may be deemed to beneficially own 6,675 Shares, constituting 0% of the Shares outstanding and consisting of 6,675 Shares held in the Ancora Family Wealth SMAs. As of the date hereof, Ancora Holdings, as the sole member of each of Ancora Alternatives and Inverness Holdings, may be deemed to beneficially own 5,840,715 Shares, constituting approximately 8.7% of the Shares outstanding and consisting of (i) 63,961 Shares beneficially owned directly by Ancora Merlin, (ii) 1,115,537 Shares beneficially owned directly by Ancora Merlin Institutional, (iii) 106,309 Shares beneficially owned directly by Ancora Catalyst, (iv) 1,100,843 Shares beneficially owned directly by Ancora Catalyst Institutional, (v) 706,242 Shares beneficially owned directly by Ancora Bellator, (vi) 400,904 Shares beneficially owned directly by Ancora Impact Q, (vii) 822,563 Shares beneficially owned directly by Ancora Impact S, (viii) 1,021,660 Shares beneficially owned directly by Ancora SPC H (ix) 496,021 Shares held in the Ancora Alternatives SMAs and (x) 6,675 Shares held in the Ancora Family Wealth SMAs. As of the date hereof, Mr. DiSanto beneficially owned directly 4,000 Shares. As the Chairman and Chief Executive Officer of Ancora Holdings, he may be deemed to beneficially own 5,840,715 Shares, constituting approximately 8.7% of the Shares outstanding and consisting of (i) 63,961 Shares beneficially owned directly by Ancora Merlin, (ii) 1,115,537 Shares beneficially owned directly by Ancora Merlin Institutional, (iii) 106,309 Shares beneficially owned directly by Ancora Catalyst, (iv) 1,100,843 Shares beneficially owned directly by Ancora Catalyst Institutional, (v) 706,242 Shares beneficially owned directly by Ancora Bellator, (vi) 400,904 Shares beneficially owned directly by Ancora Impact Q, (vii) 822,563 Shares beneficially owned directly by Ancora Impact S, (viii) 1,021,660 Shares beneficially owned directly by Ancora SPC H (ix) 496,021 Shares held in the Ancora Alternatives SMAs and (x) 6,675 Shares held in the Ancora Family Wealth SMAs. As of the date hereof, the Reporting Persons hold 1,504,140 Warrants, exercisable for an aggregate of 1,504,140 Shares. Each Warrant entitles the holder thereof to acquire, for a nominal exercise price of $0.01, one Share. The Warrants are only exercisable to the extent that the holder, together with its affiliates and any other person or entity acting as a group, would not beneficially own more than 19.8% of the outstanding Shares after giving effect to such exercise, as such percentage ownership is determined in accordance with the terms of the Warrants (the "Beneficial Ownership Limitation"). As of the date hereof, the Beneficial Ownership Limitation does not prohibit the exercise of the Warrants held by the Reporting Persons.

Item 5(b) is hereby amended and restated to read as follows: (i) Ancora Merlin 1. Sole power to vote or direct vote: 0 2. Shared power to vote or direct vote: 63,961 3. Sole power to dispose or direct the disposition: 0 4. Shared power to dispose or direct the disposition: 63,961 (ii) Ancora Merlin Institutional 1. Sole power to vote or direct vote: 0 2. Shared power to vote or direct vote: 1,115,537 3. Sole power to dispose or direct the disposition: 0 4. Shared power to dispose or direct the disposition: 1,115,537 (iii) Ancora Catalyst 1. Sole power to vote or direct vote: 0 2. Shared power to vote or direct vote: 106,309 3. Sole power to dispose or direct the disposition: 0 4. Shared power to dispose or direct the disposition: 106,309 (iv) Ancora Catalyst Institutional 1. Sole power to vote or direct vote: 0 2. Shared power to vote or direct vote: 1,100,843 3. Sole power to dispose or direct the disposition: 0 4. Shared power to dispose or direct the disposition: 1,100,843 (v) Ancora Bellator 1. Sole power to vote or direct vote: 0 2. Shared power to vote or direct vote: 706,242 3. Sole power to dispose or direct the disposition: 0 4. Shared power to dispose or direct the disposition: 706,242 (vi) Ancora Impact Q 1. Sole power to vote or direct vote: 0 2. Shared power to vote or direct vote: 400,904 3. Sole power to dispose or direct the disposition: 0 4. Shared power to dispose or direct the disposition: 400,904 (vii) Ancora Impact S 1. Sole power to vote or direct vote: 0 2. Shared power to vote or direct vote: 822,563 3. Sole power to dispose or direct the disposition: 0 4. Shared power to dispose or direct the disposition: 822,563 (viii) Ancora SPC H 1. Sole power to vote or direct vote: 0 2. Shared power to vote or direct vote: 1,021,660 3. Sole power to dispose or direct the disposition: 0 4. Shared power to dispose or direct the disposition: 1,021,660 (ix) Ancora Alternatives 1. Sole power to vote or direct vote: 0 2. Shared power to vote or direct vote: 5,834,040 3. Sole power to dispose or direct the disposition: 0 4. Shared power to dispose or direct the disposition: 5,834,040 (x) Ancora Family Wealth 1. Sole power to vote or direct vote: 0 2. Shared power to vote or direct vote: 6,675 3. Sole power to dispose or direct the disposition: 0 4. Shared power to dispose or direct the disposition: 6,675 (xi) Inverness Holdings 1. Sole power to vote or direct vote: 0 2. Shared power to vote or direct vote: 6,675 3. Sole power to dispose or direct the disposition: 0 4. Shared power to dispose or direct the disposition: 6,675 (xii) Ancora Holdings 1. Sole power to vote or direct vote: 0 2. Shared power to vote or direct vote: 5,840,715 3. Sole power to dispose or direct the disposition: 0 4. Shared power to dispose or direct the disposition: 5,840,715 (xiii) Mr. DiSanto 1. Sole power to vote or direct vote: 4,000 2. Shared power to vote or direct vote: 5,840,715 3. Sole power to dispose or direct the disposition: 4,000 4. Shared power to dispose or direct the disposition: 5,840,715